discretization/cellcentered/tpfa/fvgridgeometry.hh

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// -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
// vi: set et ts=4 sw=4 sts=4:
//
// SPDX-FileCopyrightText: Copyright © DuMux Project contributors, see AUTHORS.md in root folder
// SPDX-License-Identifier: GPL-3.0-or-later
//
#ifndef DUMUX_DISCRETIZATION_CCTPFA_FV_GRID_GEOMETRY_HH
#define DUMUX_DISCRETIZATION_CCTPFA_FV_GRID_GEOMETRY_HH
 
#include <utility>
#include <algorithm>
 
#include <dumux/common/indextraits.hh>
#include <dumux/common/defaultmappertraits.hh>
 
#include <dumux/discretization/method.hh>
#include <dumux/discretization/basegridgeometry.hh>
#include <dumux/discretization/checkoverlapsize.hh>
#include <dumux/discretization/cellcentered/subcontrolvolume.hh>
#include <dumux/discretization/cellcentered/connectivitymap.hh>
#include <dumux/discretization/cellcentered/tpfa/fvelementgeometry.hh>
#include <dumux/discretization/cellcentered/tpfa/subcontrolvolumeface.hh>
#include <dumux/discretization/extrusion.hh>
 
#include <dumux/io/grid/periodicgridtraits.hh>
 
namespace Dumux {
 
template<class GridView, class MapperTraits = DefaultMapperTraits<GridView>>
struct CCTpfaDefaultGridGeometryTraits
: public MapperTraits
{
    using SubControlVolume = CCSubControlVolume<GridView>;
    using SubControlVolumeFace = CCTpfaSubControlVolumeFace<GridView>;
 
    template<class GridGeometry>
    using ConnectivityMap = CCSimpleConnectivityMap<GridGeometry>;
 
    template<class GridGeometry, bool enableCache>
    using LocalView = CCTpfaFVElementGeometry<GridGeometry, enableCache>;
 
    static constexpr int maxNumScvfNeighbors = int(GridView::dimension)<int(GridView::dimensionworld) ? 8 : 1<<(GridView::dimension-1);
};
 
template<class GridView,
         bool enableGridGeometryCache = false,
         class Traits = CCTpfaDefaultGridGeometryTraits<GridView> >
class CCTpfaFVGridGeometry;
 
template<class GV, class Traits>
class CCTpfaFVGridGeometry<GV, true, Traits>
: public BaseGridGeometry<GV, Traits>
{
    using ThisType = CCTpfaFVGridGeometry<GV, true, Traits>;
    using ParentType = BaseGridGeometry<GV, Traits>;
    using ConnectivityMap = typename Traits::template ConnectivityMap<ThisType>;
    using GridIndexType = typename IndexTraits<GV>::GridIndex;
    using Element = typename GV::template Codim<0>::Entity;
 
    static const int dim = GV::dimension;
    static const int dimWorld = GV::dimensionworld;
 
public:
    using BasicGridGeometry = BasicGridGeometry_t<GV, Traits>;
    using LocalView = typename Traits::template LocalView<ThisType, true>;
    using SubControlVolume = typename Traits::SubControlVolume;
    using SubControlVolumeFace = typename Traits::SubControlVolumeFace;
    using Extrusion = Extrusion_t<Traits>;
    using DofMapper = typename Traits::ElementMapper;
    using SupportsPeriodicity = typename PeriodicGridTraits<typename GV::Grid>::SupportsPeriodicity;
 
    using DiscretizationMethod = DiscretizationMethods::CCTpfa;
    static constexpr DiscretizationMethod discMethod{};
 
    static constexpr int maxElementStencilSize = LocalView::maxNumElementScvfs*Traits::maxNumScvfNeighbors + 1;
 
    using GridView = GV;
 
    CCTpfaFVGridGeometry(std::shared_ptr<BasicGridGeometry> gg)
    : ParentType(std::move(gg))
    , periodicGridTraits_(this->gridView().grid())
    {
        // Check if the overlap size is what we expect
        if (!CheckOverlapSize<DiscretizationMethod>::isValid(this->gridView()))
            DUNE_THROW(Dune::InvalidStateException, "The cctpfa discretization method needs at least an overlap of 1 for parallel computations. "
                                                     << " Set the parameter \"Grid.Overlap\" in the input file.");
 
        update_();
    }
 
    CCTpfaFVGridGeometry(const GridView& gridView)
    : CCTpfaFVGridGeometry(std::make_shared<BasicGridGeometry>(gridView))
    {}
 
    const DofMapper& dofMapper() const
    { return this->elementMapper(); }
 
    std::size_t numScv() const
    {
        return scvs_.size();
    }
 
    std::size_t numScvf() const
    {
        return scvfs_.size();
    }
 
    std::size_t numBoundaryScvf() const
    {
        return numBoundaryScvf_;
    }
 
    std::size_t numDofs() const
    { return this->gridView().size(0); }
 
 
    void update(const GridView& gridView)
    {
        ParentType::update(gridView);
        update_();
    }
 
    void update(GridView&& gridView)
    {
        ParentType::update(std::move(gridView));
        update_();
    }
 
    const SubControlVolume& scv(GridIndexType scvIdx) const
    {
        return scvs_[scvIdx];
    }
 
    const SubControlVolumeFace& scvf(GridIndexType scvfIdx) const
    {
        return scvfs_[scvfIdx];
    }
 
    const SubControlVolumeFace& flipScvf(GridIndexType scvfIdx, unsigned int outsideScvfIdx = 0) const
    {
        return scvfs_[flipScvfIndices_[scvfIdx][outsideScvfIdx]];
    }
 
    const std::vector<GridIndexType>& scvfIndicesOfScv(GridIndexType scvIdx) const
    {
        return scvfIndicesOfScv_[scvIdx];
    }
 
    const ConnectivityMap &connectivityMap() const
    { return connectivityMap_; }
 
    bool hasBoundaryScvf(GridIndexType eIdx) const
    { return hasBoundaryScvf_[eIdx]; }
 
private:
 
    void update_()
    {
        // clear containers (necessary after grid refinement)
        scvs_.clear();
        scvfs_.clear();
        scvfIndicesOfScv_.clear();
        flipScvfIndices_.clear();
 
        // determine size of containers
        std::size_t numScvs = numDofs();
        std::size_t numScvf = 0;
        for (const auto& element : elements(this->gridView()))
            numScvf += element.subEntities(1);
 
        // reserve memory
        scvs_.resize(numScvs);
        scvfs_.reserve(numScvf);
        scvfIndicesOfScv_.resize(numScvs);
        hasBoundaryScvf_.assign(numScvs, false);
 
        // Build the scvs and scv faces
        GridIndexType scvfIdx = 0;
        numBoundaryScvf_ = 0;
        for (const auto& element : elements(this->gridView()))
        {
            const auto eIdx = this->elementMapper().index(element);
            scvs_[eIdx] = SubControlVolume(element.geometry(), eIdx);
 
            // the element-wise index sets for finite volume geometry
            std::vector<GridIndexType> scvfsIndexSet;
            scvfsIndexSet.reserve(element.subEntities(1));
 
            // for network grids there might be multiple intersection with the same geometryInInside
            // we identify those by the indexInInside for now (assumes conforming grids at branching facets)
            using ScvfGridIndexStorage = typename SubControlVolumeFace::Traits::GridIndexStorage;
            std::vector<ScvfGridIndexStorage> outsideIndices;
            if (dim < dimWorld)
            {
                outsideIndices.resize(element.subEntities(1));
                std::for_each(outsideIndices.begin(), outsideIndices.end(), [eIdx] (auto& nIndices) { nIndices.push_back(eIdx); });
 
                // second, insert neighbors
                for (const auto& intersection : intersections(this->gridView(), element))
                {
                    if (intersection.neighbor())
                    {
                        const auto nIdx = this->elementMapper().index( intersection.outside() );
                        outsideIndices[intersection.indexInInside()].push_back(nIdx);
                    }
                }
            }
 
            for (const auto& intersection : intersections(this->gridView(), element))
            {
                // inner sub control volume faces (includes periodic boundaries)
                if (intersection.neighbor())
                {
                    // update the grid geometry if we have periodic boundaries
                    if (periodicGridTraits_.isPeriodic(intersection))
                        this->setPeriodic();
 
                    if (dim == dimWorld)
                    {
                        const auto nIdx = this->elementMapper().index(intersection.outside());
                        scvfs_.emplace_back(intersection,
                                            intersection.geometry(),
                                            scvfIdx,
                                            ScvfGridIndexStorage({eIdx, nIdx}),
                                            false);
                        scvfsIndexSet.push_back(scvfIdx++);
                    }
                    // this is for network grids
                    // (will be optimized away of dim == dimWorld)
                    else
                    {
                        auto indexInInside = intersection.indexInInside();
                        // check if we already handled this facet
                        if (outsideIndices[indexInInside].empty())
                            continue;
                        else
                        {
                            scvfs_.emplace_back(intersection,
                                                intersection.geometry(),
                                                scvfIdx,
                                                outsideIndices[indexInInside],
                                                false);
                            scvfsIndexSet.push_back(scvfIdx++);
                            outsideIndices[indexInInside].clear();
                        }
                    }
                }
                // boundary sub control volume faces
                else if (intersection.boundary())
                {
                    scvfs_.emplace_back(intersection,
                                        intersection.geometry(),
                                        scvfIdx,
                                        ScvfGridIndexStorage({eIdx, static_cast<GridIndexType>(this->gridView().size(0) + numBoundaryScvf_++)}),
                                        true);
                    scvfsIndexSet.push_back(scvfIdx++);
 
                    hasBoundaryScvf_[eIdx] = true;
                }
            }
 
            // Save the scvf indices belonging to this scv to build up fv element geometries fast
            scvfIndicesOfScv_[eIdx] = scvfsIndexSet;
        }
 
        // Make the flip index set for network, surface, and periodic grids
        if (dim < dimWorld || this->isPeriodic())
        {
            flipScvfIndices_.resize(scvfs_.size());
            for (auto&& scvf : scvfs_)
            {
                if (scvf.boundary())
                    continue;
 
                flipScvfIndices_[scvf.index()].resize(scvf.numOutsideScvs());
                const auto insideScvIdx = scvf.insideScvIdx();
                // check which outside scvf has the insideScvIdx index in its outsideScvIndices
                for (unsigned int i = 0; i < scvf.numOutsideScvs(); ++i)
                    flipScvfIndices_[scvf.index()][i] = findFlippedScvfIndex_(insideScvIdx, scvf.outsideScvIdx(i));
            }
        }
 
        // build the connectivity map for an efficient assembly
        connectivityMap_.update(*this);
    }
 
    // find the scvf that has insideScvIdx in its outsideScvIdx list and outsideScvIdx as its insideScvIdx
    GridIndexType findFlippedScvfIndex_(GridIndexType insideScvIdx, GridIndexType outsideScvIdx)
    {
        // go over all potential scvfs of the outside scv
        for (auto outsideScvfIndex : scvfIndicesOfScv_[outsideScvIdx])
        {
            const auto& outsideScvf = this->scvf(outsideScvfIndex);
            for (unsigned int j = 0; j < outsideScvf.numOutsideScvs(); ++j)
                if (outsideScvf.outsideScvIdx(j) == insideScvIdx)
                    return outsideScvf.index();
        }
 
        DUNE_THROW(Dune::InvalidStateException, "No flipped version of this scvf found!");
    }
 
    ConnectivityMap connectivityMap_;
 
    std::vector<SubControlVolume> scvs_;
    std::vector<SubControlVolumeFace> scvfs_;
    std::vector<std::vector<GridIndexType>> scvfIndicesOfScv_;
    std::size_t numBoundaryScvf_;
    std::vector<bool> hasBoundaryScvf_;
 
    std::vector<std::vector<GridIndexType>> flipScvfIndices_;
 
    PeriodicGridTraits<typename GridView::Grid> periodicGridTraits_;
};
 
template<class GV, class Traits>
class CCTpfaFVGridGeometry<GV, false, Traits>
: public BaseGridGeometry<GV, Traits>
{
    using ThisType = CCTpfaFVGridGeometry<GV, false, Traits>;
    using ParentType = BaseGridGeometry<GV, Traits>;
    using ConnectivityMap = typename Traits::template ConnectivityMap<ThisType>;
 
    using GridIndexType = typename IndexTraits<GV>::GridIndex;
    using Element = typename GV::template Codim<0>::Entity;
 
    static const int dim = GV::dimension;
    static const int dimWorld = GV::dimensionworld;
 
    using ScvfGridIndexStorage = typename Traits::SubControlVolumeFace::Traits::GridIndexStorage;
    using NeighborVolVarIndices = typename std::conditional_t< (dim<dimWorld),
                                                               ScvfGridIndexStorage,
                                                               Dune::ReservedVector<GridIndexType, 1> >;
 
public:
    using BasicGridGeometry = BasicGridGeometry_t<GV, Traits>;
    using LocalView = typename Traits::template LocalView<ThisType, false>;
    using SubControlVolume = typename Traits::SubControlVolume;
    using SubControlVolumeFace = typename Traits::SubControlVolumeFace;
    using Extrusion = Extrusion_t<Traits>;
    using DofMapper = typename Traits::ElementMapper;
    using SupportsPeriodicity = typename PeriodicGridTraits<typename GV::Grid>::SupportsPeriodicity;
 
    using DiscretizationMethod = DiscretizationMethods::CCTpfa;
    static constexpr DiscretizationMethod discMethod{};
 
    static constexpr int maxElementStencilSize = LocalView::maxNumElementScvfs*Traits::maxNumScvfNeighbors + 1;
 
    using GridView = GV;
 
    CCTpfaFVGridGeometry(std::shared_ptr<BasicGridGeometry> gg)
    : ParentType(std::move(gg))
    , periodicGridTraits_(this->gridView().grid())
    {
        // Check if the overlap size is what we expect
        if (!CheckOverlapSize<DiscretizationMethod>::isValid(this->gridView()))
            DUNE_THROW(Dune::InvalidStateException, "The cctpfa discretization method needs at least an overlap of 1 for parallel computations. "
                                                     << " Set the parameter \"Grid.Overlap\" in the input file.");
 
        update_();
    }
 
    CCTpfaFVGridGeometry(const GridView& gridView)
    : CCTpfaFVGridGeometry(std::make_shared<BasicGridGeometry>(gridView))
    {}
 
    const DofMapper& dofMapper() const
    { return this->elementMapper(); }
 
    std::size_t numScv() const
    {
        return numScvs_;
    }
 
    std::size_t numScvf() const
    {
        return numScvf_;
    }
 
    std::size_t numBoundaryScvf() const
    {
        return numBoundaryScvf_;
    }
 
    std::size_t numDofs() const
    { return this->gridView().size(0); }
 
    void update(const GridView& gridView)
    {
        ParentType::update(gridView);
        update_();
    }
 
    void update(GridView&& gridView)
    {
        ParentType::update(std::move(gridView));
        update_();
    }
 
    const std::vector<GridIndexType>& scvfIndicesOfScv(GridIndexType scvIdx) const
    { return scvfIndicesOfScv_[scvIdx]; }
 
    const std::vector<NeighborVolVarIndices>& neighborVolVarIndices(GridIndexType scvIdx) const
    { return neighborVolVarIndices_[scvIdx]; }
 
    const ConnectivityMap &connectivityMap() const
    { return connectivityMap_; }
 
private:
 
    void update_()
    {
        // clear local data
        scvfIndicesOfScv_.clear();
        neighborVolVarIndices_.clear();
 
        // reserve memory or resize the containers
        numScvs_ = numDofs();
        numScvf_ = 0;
        numBoundaryScvf_ = 0;
        scvfIndicesOfScv_.resize(numScvs_);
        neighborVolVarIndices_.resize(numScvs_);
 
        // Build the SCV and SCV face
        for (const auto& element : elements(this->gridView()))
        {
            const auto eIdx = this->elementMapper().index(element);
 
            // the element-wise index sets for finite volume geometry
            auto numLocalFaces = element.subEntities(1);
            std::vector<GridIndexType> scvfsIndexSet;
            std::vector<NeighborVolVarIndices> neighborVolVarIndexSet;
            scvfsIndexSet.reserve(numLocalFaces);
            neighborVolVarIndexSet.reserve(numLocalFaces);
 
            // for network grids there might be multiple intersection with the same geometryInInside
            // we identify those by the indexInInside for now (assumes conforming grids at branching facets)
            std::vector<NeighborVolVarIndices> outsideIndices;
            if (dim < dimWorld)
            {
                outsideIndices.resize(numLocalFaces);
                for (const auto& intersection : intersections(this->gridView(), element))
                {
                    if (intersection.neighbor())
                    {
                        const auto nIdx = this->elementMapper().index(intersection.outside());
                        outsideIndices[intersection.indexInInside()].push_back(nIdx);
                    }
                }
            }
 
            for (const auto& intersection : intersections(this->gridView(), element))
            {
                // inner sub control volume faces (includes periodic boundaries)
                if (intersection.neighbor())
                {
                    // update the grid geometry if we have periodic boundaries
                    if (periodicGridTraits_.isPeriodic(intersection))
                        this->setPeriodic();
 
                    if (dim == dimWorld)
                    {
                        scvfsIndexSet.push_back(numScvf_++);
                        const auto nIdx = this->elementMapper().index(intersection.outside());
                        neighborVolVarIndexSet.emplace_back(NeighborVolVarIndices({nIdx}));
                    }
                    // this is for network grids
                    // (will be optimized away of dim == dimWorld)
                    else
                    {
                        auto indexInInside = intersection.indexInInside();
                        // check if we already handled this facet
                        if (outsideIndices[indexInInside].empty())
                            continue;
                        else
                        {
                            scvfsIndexSet.push_back(numScvf_++);
                            neighborVolVarIndexSet.emplace_back(std::move(outsideIndices[indexInInside]));
                            outsideIndices[indexInInside].clear();
                        }
                    }
                }
                // boundary sub control volume faces
                else if (intersection.boundary())
                {
                    scvfsIndexSet.push_back(numScvf_++);
                    neighborVolVarIndexSet.emplace_back(NeighborVolVarIndices({static_cast<GridIndexType>(numScvs_ + numBoundaryScvf_++)}));
                }
            }
 
            // store the sets of indices in the data container
            scvfIndicesOfScv_[eIdx] = scvfsIndexSet;
            neighborVolVarIndices_[eIdx] = neighborVolVarIndexSet;
        }
 
        // build the connectivity map for an efficient assembly
        connectivityMap_.update(*this);
    }
 
    std::size_t numScvs_;
    std::size_t numScvf_;
    std::size_t numBoundaryScvf_;
 
    ConnectivityMap connectivityMap_;
 
    std::vector<std::vector<GridIndexType>> scvfIndicesOfScv_;
    std::vector<std::vector<NeighborVolVarIndices>> neighborVolVarIndices_;
 
    PeriodicGridTraits<typename GridView::Grid> periodicGridTraits_;
};
 
} // end namespace Dumux
 
#endif